Archive for the ‘Science’ Category

Complexity Constrains Evolution Of Human Brain Genes

Friday, December 29th, 2006

Science Daily Despite the explosive growth in size and complexity of the human brain, the pace of evolutionary change among the thousands of genes expressed in brain tissue has actually slowed since the split, millions of years ago, between human and chimpanzee, an international research team reports in the December 26, 2006, issue of the journal, PLOS Biology.

Homer sapiens

The rapid advance of the human brain, the authors maintain, has not been driven by evolution of protein sequences. The higher complexity of the biochemical network in the brain, they suspect, with multiple gene-gene interactions, places strong constraints on the ability of most brain-related genes to change.

“We found that genes expressed in the human brain have in fact slowed down in their evolution, contrary to some earlier reports,” says study author Chung-I Wu, professor of ecology and evolution at the University of Chicago. “The more complex the brain, it seems, the more difficult it becomes for brain genes to change. Calibrated against the genomic average, brain-expressed genes in humans appear to have evolved more slowly than in chimpanzee or old-world monkey.”

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Warmer Atlantic, Climate Change Presage More, and Worse, Western Wildfires

Thursday, December 28th, 2006

Historical record suggests the American West is “primed” for climate change-inspired conflagrations.

Between 1650 and 1749, fires raged across western North America from what is now British Columbia down into northern Mexico. In contrast, the following century saw scattered, sporadic wildfires. By combining tree-ring records stretching back 450 years as well as fire-scar data from more than 4,700 burned trees, scientists have now created an extended log of the climate in the western U.S. and its attendant wildfires. And this record has revealed that temperature shifts in the waters of the northern Atlantic help determine the scale and intensity of western wildfires.

Forest ecologist Thomas Swetnam of the University of Arizona and a team of international colleagues collected tree-ring and fire-scar data from 241 logging sites across western North America. The scars revealed the dates of at least 33,975 individual fires stretching back to 1550. “We got most of our fire-scar samples from dead trees, stumps and logs. They’re cookies,” or cross sections, Swetnam explains. “A single tree might have 10 or even 20 different scars on it.”

The researchers compared this long fire record with weather patterns: the well-known El Nino and La Nina cycles that occur every two to seven years, as well as longer cycles called the Pacific Decadal Oscillation and the Atlantic Multidecadal Oscillation (AMO). “Fire activity correlated with–as we expect–drought, but also with these interesting oscillations in the Pacific and Atlantic,” Swetnam notes. “The North Atlantic, and warming temperatures there, have apparently had some importance in drought occurrence and fire activity.”

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Single Gene Could Lead to Long Life, Better Mental Function

Thursday, December 28th, 2006

A variation of a gene that controls the size of cholesterol molecules in the bloodstream is common among elderly Ashkenazim who remain mentally sharp.

If you live to 100, as roughly one in every 10,000 people do, you will likely want both your mind and body intact. Researchers have now discovered a gene that accomplishes just that, apparently protecting the brain as well as prolonging life.

The Longevity Genes Project, initiated by Nir Barzilai, director of the Institute for Aging Research at Albert Einstein College of Medicine, investigates people who live exceptionally long lives.

“There’s a strong family history of longevity in these people,” says Barzilai. “Research has shown the odds of having exceptional longevity are about 10 to 18 times more if you have a centenarian in your family. And these usually aren’t vegetarians or professional athletes. Some have smoked for 90 years.”

Barzilai and his colleagues examined 158 people of Ashkenazi, or Eastern European Jewish, descent who were 95 years of age or older. They chose Ashkenazi Jews since current generations stem from a relatively limited number of ancestors. This means they have a comparatively uniform genetic makeup, making it easier to identify important genetic differences.

The scientists gave these volunteers a common test of mental function, consisting of 30 questions. Correctly answering 25 of the questions meant a subject passed the test. Those centenarians who passed were two to three times more likely to have a common variant of a particular gene, called the CETP gene, than those who did not. When the researchers studied another 124 Ashkenazi Jews between 75 and 85 years of age, those subjects who passed the test of mental function were five times more likely to have this gene variant than their counterparts.

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Team Discovers Key Step In Flu Virus Replication

Thursday, December 28th, 2006

– The H5N1 Avian Flu Influenza virus is a latent plague just waiting to break out if and when it mutates into a form which can easily jump from human to human. I’ve written about this here: , and . So, any iinsights into how it works and how it can be subverted is great news.
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Science Daily As public health officials around the world keep a nervous eye on the spread of avian influenza, the University of Saskatchewan’s Vaccine and Infectious Disease Organization (VIDO) has uncovered a key step in how the influenza virus causes infection.

Yan Zhou and her team have discovered how a crucial pathway that supports the influenza A virus’s ability to reproduce itself is activated, a finding that could pave the way for new drugs and vaccines.

The paper will appear in the January 2007 issue of the Journal of General Virology and recently has been given advance on-line publication.

“The work we are doing will be applicable to all influenza viruses, including influenza A virus subtype H5N1,” said VIDO Director Lorne Babiuk.

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Parasite ‘turns women into sex kittens’

Thursday, December 28th, 2006

– Well, that’s certainly an attention getting title, eh? But, sensationalism aside, there appears to be something going on with human beings and the Toxoplasma gondii parasite. I’ve written twice before about this bug here and here

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A COMMON parasite can increase a women’s attractiveness to the opposite sex but also make men more stupid, an Australian researcher says.

About 40 per cent of the world’s population is infected with Toxoplasma gondii, including about eight million Australians.

Human infection generally occurs when people eat raw or undercooked meat that has cysts containing the parasite, or accidentally ingest some of the parasite’s eggs excreted by an infected cat.

The parasite is known to be dangerous to pregnant women as it can cause disability or abortion of the unborn child, and can also kill people whose immune systems are weakened.

Until recently it was thought to be an insignificant disease in healthy people, Sydney University of Technology infectious disease researcher Nicky Boulter said, but new research has revealed its mind-altering properties.

“Interestingly, the effect of infection is different between men and women,” Dr Boulter writes in the latest issue of Australasian Science magazine.

“Infected men have lower IQs, achieve a lower level of education and have shorter attention spans. They are also more likely to break rules and take risks, be more independent, more anti-social, suspicious, jealous and morose, and are deemed less attractive to women.

“On the other hand, infected women tend to be more outgoing, friendly, more promiscuous, and are considered more attractive to men compared with non-infected controls.

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061228 – Thursday – Emergent Properties

Wednesday, December 27th, 2006

I’ve been frustrated for some time by thinking that I understand what an emergent property is – but having a hard time coming up with an easily grasped example when I’m trying to explain it.

Today, while I was reading The Revenge of Gaia: Earth’s Climate Crisis and the Fate of Humanity by James Lovelock over lunch, I came across an example he provided that I loved.

Remember, the basic idea with an emergent property is that simple units come together and combine and form an aggregate that is more than the obvious sum of their parts and this new property, itself, generally provides something of value which is, itself, then conserved.

Lovelock was talking about the governor James Watt created to control the speed of his steam engine.

…it consists of a vertical shaft driven by the engine on which is mounted two arms that carry metal balls at their ends. The arms are hinged to the shaft so that, as the shaft rotates, the balls swing out. The faster the engine runs, the higher the balls are lifted; a second pair of arms connected to those carrying the rotating balls simply lifts a level controlling the flow of the steam from the boiler of the engine. The faster the engine runs the more the steam valve is closed. It was obvious to me as a child, that the engine would settle down and run at a constant speed, and that simply by changing the setting of the connection to the steam valve the speed could be set as high or as low as one wished.

So, here we have a spinning shaft, some balls on arms and a linkage to the valve controlling the steam flow. When you put them all together, you have a brand new something which regulates the speed of the engine it is connected to. A new something which is would be impossible to predict the characteristics of by simply examining the component parts separately.

Free to choose?

Saturday, December 23rd, 2006

Modern neuroscience is eroding the idea of free will

In the late 1990s a previously blameless American began collecting child pornography and propositioning children. On the day before he was due to be sentenced to prison for his crimes, he had his brain scanned. He had a tumour. When it had been removed, his paedophilic tendencies went away. When it started growing back, they returned. When the regrowth was removed, they vanished again. Who then was the child abuser?

His case dramatically illustrates the challenge that modern neuroscience is beginning to pose to the idea of free will. The instinct of the reasonable observer is that organic changes of this sort somehow absolve the sufferer of the responsibility that would accrue to a child abuser whose paedophilia was congenital. But why? The chances are that the latter tendency is just as traceable to brain mechanics as the former; it is merely that no one has yet looked. Scientists have looked at anger and violence, though, and discovered genetic variations, expressed as concentrations of a particular messenger molecule in the brain, that are both congenital and predisposing to a violent temper. Where is free will in this case?

Free will is one of the trickiest concepts in philosophy, but also one of the most important. Without it, the idea of responsibility for one’s actions flies out of the window, along with much of the glue that holds a free society (and even an unfree one) together. If businessmen were no longer responsible for their contracts, criminals no longer responsible for their crimes and parents no longer responsible for their children, even though contract, crime and conception were “freely” entered into, then social relations would be very different

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From Scum, Perhaps the Tiniest Form of Life

Saturday, December 23rd, 2006

The smallest form of life known to science just got smaller.

Four million of a newly discovered microbe — assuming the discovery, reported yesterday in the journal Science, is confirmed — could fit into the period at the end of this sentence.

Scientists found the microbes living in a remarkably inhospitable environment, drainage water as caustic as battery acid from a mine in Northern California. The microbes, members of an ancient family of organisms known as archaea, formed a pink scum on green pools of hot mine water laden with toxic metals, including arsenic.

“It was amazing,” said Jillian F. Banfield of the University of California, Berkeley, a member of the discovery team. “These were totally new.” In their paper, the scientists call the microbes “smaller than any other known cellular life form.”

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– this story is from the NY Times which requires an ID and PW to login. You just have to sign up once to get these and they are free.

Kiwi mouse that waddled

Tuesday, December 12th, 2006

– It’s been the general wisdom that New Zealand did not have any native mammals other than one or two bats. Now, scientists have found fossils of a small mammal from 16 million years ago and they are having to do a rethink.

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The discovery of fossils from a waddling, mouse-sized mammal in a New Zealand lake bed has stunned scientists, and could force a “rethink” on the evolution of this country’s animals.
The bones from the primitive mammal, described as unlike any mammal alive today, were discovered in sediment at least 16 million years old. They suggest the mammal was mouse-sized and walked by waddling.

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Water ‘flowed recently’ on Mars

Monday, December 11th, 2006

Nasa says it has found “compelling” evidence that liquid water flowed recently on the surface of Mars.The finding adds further weight to the idea that Mars might harbour the right conditions for life.

The appearance of gullies, revealed in orbital images from a Nasa probe, suggests that water could have flowed on the surface in the last few years.

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